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High-Throughput Segmentation of Tiled Biological Structures using Random-Walk Distance Transforms


Daniel Baum, James C. Weaver, Igor Zlotnikov, David Knotel, Lara Tomholt, and Mason N. Dean


Integrative and Comparative Biology, volume 59, number 6, pp. 1700–1712

Research Highlight (with article links)

High-throughput segmentation and data analysis of complex

multi-component skeletal systems

Brittle Stars as a Case Study The Structural Origins of Brittle Star Arm Kinematics: An Integrated Tomographic, Additive Manufacturing, and Parametric Modeling-Based Approach Lara Tomholt, Larry J. Friesen, Daniel Berdichevsky, Matheus C. Fernandes, Christoph Pierre, Robert J. Wood, and James C. Weaver Journal of Structural Biology 211 (1), 107481https://scholar.harvard.edu/files/fernandes/files/2020_tomholtfernandesweaver-starfishpaper.pdf
https://scholar.harvard.edu/files/fernandes/files/2020_tomholtfernandesweaver-starfishpaper.pdf

Sea Stars as a Case Study


High-throughput segmentation, data visualization, and analysis of sea star skeletal networks


Lara Tomholt, Daniel Baum, Robert J. Wood, and

James C. Weaver


Journal of Structural Biology 215 (2), 107955

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https://academic.oup.com/icb/article-pdf/59/6/1700/31503494/icz117.pdf
Segment_files/1-s2.0-S1047847723000187-main.pdf